 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_64057.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
NAC |
| Protein Properties |
Length: 274aa MW: 30076.9 Da PI: 6.9547 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_64057.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 107 | 2.3e-33 | 2 | 77 | 54 | 129 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ekewyfF+++d+ky+tg+r+nrat sgyWkatgkdke+++ +g lvg+kktLvfy grap+gekt Wvmhe+rle
MLOC_64057.1 2 GEKEWYFFCHKDRKYPTGTRTNRATMSGYWKATGKDKEIFRGRGILVGMKKTLVFYLGRAPRGEKTGWVMHEFRLE 77
578**********************************************************************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:1900057 | Biological Process | positive regulation of leaf senescence |
| GO:1903648 | Biological Process | positive regulation of chlorophyll catabolic process |
| GO:0000975 | Molecular Function | regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MGEKEWYFFC HKDRKYPTGT RTNRATMSGY WKATGKDKEI FRGRGILVGM KKTLVFYLGR 60
APRGEKTGWV MHEFRLEGRL PHPLPRSAKD EWAVSKVFNK ELTATNGAMA TAMAAAPDAG 120
IERVSSFGFI SDHFLDAGEL PPLMDPPLGG DVDQVIDFNS NSAYATGGRS GSGLEVKMEQ 180
HMPPHMMYSS PYFSLPAANS GDLSPAIRRY CKAEQVSGQT SALSPSRDTG LSTDPNAAGC 240
AEISSAPTPS SHNQDFLDHL DEYPALNLAD IWKY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-29 | 1 | 104 | 68 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-29 | 1 | 104 | 68 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-29 | 1 | 104 | 68 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-29 | 1 | 104 | 68 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 3e-29 | 1 | 104 | 71 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 2e-29 | 1 | 104 | 68 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 2e-29 | 1 | 104 | 68 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FR819763 | 0.0 | FR819763.1 Hordeum vulgare subsp. vulgare mRNA for NAC transcription factor (NAC013 gene). |
