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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_62844.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
bHLH |
Protein Properties |
Length: 277aa MW: 30940.3 Da PI: 7.34 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_62844.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.3 | 6.6e-14 | 75 | 119 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+Er RR+++N+++ +Lr+++P+ +K++Ka+i + A+eYI++Lq
MLOC_62844.1 75 ILMERDRRRKLNEKLYTLRSVVPNI-----TKMDKASIIKDAIEYIQHLQ 119
579*********************7.....7******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MDPDMGENFA YYWETQRYLE SEELVDSIFV GATEDAISYY DSSSPDGSHS SSTLTGAAMP 60 GAGIGMGGTG ANKNILMERD RRRKLNEKLY TLRSVVPNIT KMDKASIIKD AIEYIQHLQA 120 EERQMEAEVS ALESATGADD DCDGGLSVEQ VSSAQRKKVK RALSVSSMND ALLAAAAVAS 180 PPVEVLELRV SEVSEKVLVV SVTCSKQRDA MTKVCRVLEE LRLRVITANI TSVSGCLMHT 240 LFVEVRRRRR RRRHPQFMRT SSFARFYPIR WLCFCFC
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Nucleic Localization
Signal ? help
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|
No. |
Start |
End |
Sequence |
1 | 245 | 252 | RRRRRRRR |
2 | 246 | 252 | RRRRRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK249671 | 0.0 | AK249671.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf38g03, mRNA sequence. |