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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_61814.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
Trihelix |
Protein Properties |
Length: 298aa MW: 32555.3 Da PI: 6.799 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_61814.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 66.3 | 6.5e-21 | 23 | 92 | 1 | 72 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72
rWt++e+l+Li+a+r +e+r + +W+ vs+++r++g+er+p qC+++w nl+++ kki ++ekk++
MLOC_61814.1 23 RWTRHETLVLIQAKRVTEQRAAQ--PVRLKWAVVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKKHA 92
8****************998655..5899****************************************984 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050777 | Biological Process | negative regulation of immune response |
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MMSANGDSPA GAAVTTPRSR LPRWTRHETL VLIQAKRVTE QRAAQPVRLK WAVVSAYCRR 60 HGVERGPMQC RKRWGNLSWD LKKIVAWEKK HAAALAAGDA DSTAPERESF WDMRGEQRRA 120 RQLPSSFDRE VYDAIVGAGA ANQLRPDSAE EMELADDADE HPPSPMMVMP IQARMYVPPA 180 SSQSQHECSD PATESAKKPA SDKNSTSQQD SEATFGAGVG AEDTDTATAT ATATPTAEAG 240 TTSMGRQVTE ALERGNRLLA EQLEAQRANW DADREHRRAL LAAVNKLADA AARIAERL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |