 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_61146.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
G2-like |
| Protein Properties |
Length: 430aa MW: 47674.3 Da PI: 11.7063 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_61146.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.3 | 1.3e-31 | 307 | 362 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH++Fv a++qLGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
MLOC_61146.2 307 KTRRCWSPELHRHFVAALHQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLH 362
68****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MRAPSRSPTQ HPPLLSFSRL ASPPLPSHRY QLPSVRPSVA ADRERWRAAC VPLLARVSLH 60
GAGRRRDRDA PRPGPRPQAI RRQDRRPARR RRQGAARRRR LHPRPRGGAP QDRGLPPRAA 120
PLRPPPRRRS ATHPFHPNGF SFSFFCLFVC LFRFCLTRAV ACAVIEFMKE EAAKRSERRD 180
ADDNDKRKWM STAQLWVDSR AADPLKEQKK ESALSKPMLL GGATGAPMAV SCGAMPPPPA 240
PQYFGRDDKI VGAEGLPALP MMSPAANRQF SPPADDRHQA FAAKFAAAMP PPPSGPGLQA 300
HDQQSRKTRR CWSPELHRHF VAALHQLGGP QVATPKQIRE VMKVDGLTND EVKSHLQKYR 360
LHNQRSPSSS SASHPIMLVG DLWAHQEQSS SQSRSPEGPL QLSCSGVAVS ALTVSDSSEE 420
DDRSVGYSRR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 6e-13 | 307 | 360 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 6e-13 | 307 | 360 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 6e-13 | 307 | 360 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 6e-13 | 307 | 360 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 84 | 91 | RRPARRRR |
| 2 | 84 | 100 | RRPARRRRQGAARRRRL |
| 3 | 97 | 104 | RRRLHPRP |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK359204 | 0.0 | AK359204.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1091O11. |
| GenBank | AK367283 | 0.0 | AK367283.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2054A04. |
| GenBank | AK368859 | 0.0 | AK368859.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2081E17. |
