 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_6114.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
WRKY |
Protein Properties |
Length: 256aa MW: 27674.8 Da PI: 7.545 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_6114.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 75.9 | 4.8e-24 | 49 | 110 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59
+Dg++WrKYGqK+++g+ fpr YYrCt++ gC++ k+ve+ + dp ++ ++Y+++H+++
MLOC_6114.1 49 HDGFQWRKYGQKVIRGNAFPRCYYRCTYHqdhGCSASKHVEQHnSADPPLFRVVYTNDHTCS 110
7***************************98999*******986157**************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MRGSSMLSSI GSNKRMLQQD CSGGSHAQEH TKKKARVGMR TDYTYAPYHD GFQWRKYGQK 60 VIRGNAFPRC YYRCTYHQDH GCSASKHVEQ HNSADPPLFR VVYTNDHTCS GAAAAASDYM 120 ASSMHIQQIA DASLRKADTE PERPPRPQQP RSGGGCAAAI KEEKDVIVSS LLAVIRGSCD 180 VAKSDAAHQG YSSASSLASA NCYAMSPSVA GGSREGSSSS SVSPAVLPAP DDMGLGLDFM 240 VESHWFEPLD LGWFVE
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ806391 | 0.0 | JQ806391.1 Hordeum vulgare WRKY transcript factor 53 (WRKY53) mRNA, partial cds. |