 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MLOC_60577.2 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
TCP |
Protein Properties |
Length: 400aa MW: 41719.1 Da PI: 8.7505 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_60577.2 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 125.7 | 5.1e-39 | 53 | 231 | 2 | 136 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas...nsssg...... 88
++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s +
MLOC_60577.2 53 PPKRTTSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSmlsT---Ipahlra 146
789******************************************************************999766677777663330...2566777 PP
TCP 89 ..................................kaaksaakskksqksaasalnlakesrakarar..are.rtrekmriknkl 136
+s+ + s +s + l+++ +s+a a ++ +r+ r++++m++++++
MLOC_60577.2 147 aglpgsrfgggpradawdrfvglgfggglespasTTTSSSSPLLLSFHSGSVGLDVSPSSSAAAASTelSRKrRWEQEMQQQQQQ 231
7888888889999999999999999999999986333333356666666666688888777666666555665666666666544 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MDVTGDAGGG RRPNFPLQLL EKKEEHPCSI SPAAGLGTNG SATGELQVRK AAPPKRTTSK 60 DRHTKVDGRG RRIRMPAICA ARVFQLTREL GHKTDGETIE WLLQQAEPAV IAATGTGTIP 120 ANFTSLNISL RSSGSMLSTI PAHLRAAGLP GSRFGGGPRA DAWDRFVGLG FGGGLESPAS 180 TTTSSSSPLL LSFHSGSVGL DVSPSSSAAA ASTELSRKRR WEQEMQQQQQ QHHQHQQQQQ 240 QQYQQQMAGY TQSQMPGTVW MVPTSNTQGA VAAPAGGGES IWTFPQPGSG GGGSATVYRG 300 VPSGLHFMNI PAPMAVHAQQ LGLGQAGGGG SAAASEGHMG ILAALNAYRG QHASASEVTV 360 AGHNGTAEGT THHQHQNQHQ HQHLQHGGGE PNESMSGSDS
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK369615 | 0.0 | AK369615.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2094G23. |