 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_6041.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
MYB |
| Protein Properties |
Length: 427aa MW: 46251.5 Da PI: 5.3954 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_6041.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.8 | 1.8e-16 | 42 | 89 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed llv+ v+q+G g+W+++ r g+ R++k+c++rw ++l
MLOC_6041.1 42 KGPWTAAEDALLVNHVRQHGEGNWNAVQRITGLLRCGKSCRLRWTNHL 89
79******************************99***********996 PP
|
| 2 | Myb_DNA-binding | 51.3 | 2.7e-16 | 95 | 138 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+g+++++E++l++++++qlG++ W++ a +++ gRt++++k++w++
MLOC_6041.1 95 KGAFSPDEELLIAQLHAQLGNK-WARMATHLP-GRTDNEIKNYWNT 138
799*******************.*********.***********96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009555 | Biological Process | pollen development |
| GO:0009789 | Biological Process | positive regulation of abscisic acid-activated signaling pathway |
| GO:0043068 | Biological Process | positive regulation of programmed cell death |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0090406 | Cellular Component | pollen tube |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MDAASLEEEK MAAAAAAADN LDEEAEQGGE GEEEAMPVVL KKGPWTAAED ALLVNHVRQH 60
GEGNWNAVQR ITGLLRCGKS CRLRWTNHLR PNLKKGAFSP DEELLIAQLH AQLGNKWARM 120
ATHLPGRTDN EIKNYWNTRA KRRQRAGLPM YPPEVQFQLA ITKRCRYDDF TPPQQSAGGN 180
VLDATDARYT SARPPPLDLA GQLAMANRPV QFLAQTPFSA PSSPWVKPSF ARNARYFQFP 240
HSSPVSPTTP VHPVTPELSL GHGQHGGERS RFTPLSPSPG AKAELPSGQL LPASPAAATP 300
TSGEDQQNLE AMLQELHDAI KIEPPKHVSD HAEQDGGSGG NKPEGELKDD DIGTLLDMII 360
PATFPMTEPA PPGVAPDNSG GSISQNGSND HDHHNVDLSV DHIPIISSEQ DWVLDGACQW 420
NNMSGIC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT042537 | 1e-122 | BT042537.1 Zea mays full-length cDNA clone ZM_BFb0325G13 mRNA, complete cds. |
| GenBank | KJ727532 | 1e-122 | KJ727532.1 Zea mays clone pUT5392 MYB transcription factor (MYB129) mRNA, partial cds. |
