 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_59663.6 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
MYB |
| Protein Properties |
Length: 429aa MW: 47339.9 Da PI: 6.6416 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_59663.6 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 55 | 1.8e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l + ++++G g+W+++++ g+ R++k+c++rw +yl
MLOC_59663.6 14 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
|
| 2 | Myb_DNA-binding | 43.9 | 5.5e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++ ++E++l+v++++ lG++ W+ Ia+ m+ gRt++++k+ w++
MLOC_59663.6 67 RGAFAQDEEDLIVELHAVLGNR-WSQIAAQMP-GRTDNEIKNLWNS 110
79999*****************.*********.*********9985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001944 | Biological Process | vasculature development |
| GO:0009733 | Biological Process | response to auxin |
| GO:0010089 | Biological Process | xylem development |
| GO:0010119 | Biological Process | regulation of stomatal movement |
| GO:0010214 | Biological Process | seed coat development |
| GO:0048364 | Biological Process | root development |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60
LRPDLKRGAF AQDEEDLIVE LHAVLGNRWS QIAAQMPGRT DNEIKNLWNS SLKKKLRQKG 120
IDPNTHKPLT EADRSGAAPT ISNERTSGSS DVNPSSTGAL GNFGHLLSET AQSSMLLPVY 180
DKKRPETPSL ARPKVPAKEL FLEQLTAGHE SPSSCRSSGP TLYFPFQQQL GYSNECGSGD 240
GANMNSLWFN QNDFNCSTIS TVMPTVSPSA LSTPMGLNLP PDNHRHGGTG IGSAPFYWDG 300
VNPSSSGSTG SSGSNSMGFE PQSTNSILEN SVFPWTDIGV GQEKDTRVQL VEELKWPDLL 360
HGTFAEATTA MQNQSQSLYD DVIKAESQFN MEGICASWFQ NQQPQQQLQA ASDMYDKDLQ 420
RMPLSFEHI
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK250733 | 0.0 | AK250733.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf88d11, mRNA sequence. |
