 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_5869.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
NF-YA |
| Protein Properties |
Length: 231aa MW: 24482.5 Da PI: 8.741 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_5869.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 51.6 | 3e-16 | 179 | 213 | 1 | 36 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36
+ep+YVNaKQy++Il+RRq+Rak+e e+k +k+rk
MLOC_5869.1 179 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARK 213
69***************************6.66655 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MSGMGSRPGE SNLVEPRGLP SGGMAMQPWW TGSGFGAVSP AVVAPGSAAG ISLSSNPLGG 60
GAAKGAAQGK KKKKKTVDDD DDARGESSDD DSPRSGEPKD GSFDEEKQHA ASRMPALASD 120
YLPPYSQLEL SQPMASAPYP YPDAYYAGMV GPYGAQAVAH FQLPGLTHSR MPLPLEVSEE 180
PVYVNAKQYH GILRRRQSRA KAELERKAIK ARKFGSSISS CVRCCAQPYL H
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK354116 | 0.0 | AK354116.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1005C04. |
