PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_57051.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family WRKY
Protein Properties Length: 290aa    MW: 31690.4 Da    PI: 8.2167
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_57051.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.13.1e-22138199259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                   +Dg++WrKYG K++ ++ fprsYYrC ++   +Cp+kk+v+++ ++dp ++++t  ++H+++
  MLOC_57051.1 138 NDGFHWRKYGEKKILNAVFPRSYYRCGYSdehECPAKKHVQQQnNSDPPMFIVTLFNDHTCS 199
                   7**************************998899*******9761579************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-22132199IPR003657WRKY domain
SuperFamilySSF1182902.35E-21132199IPR003657WRKY domain
SMARTSM007745.0E-32137200IPR003657WRKY domain
PROSITE profilePS5081116.914138201IPR003657WRKY domain
PfamPF031061.6E-23138198IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MAMRTKSEMS PPPSDQRDAV IEELRKGAQL AECLRQQLEL IPELGRRNAA LANVSNISTT  60
LSSSVSMLQS DREQYSYSSS DARAASYAAG AACGGRRSGG GVGAQNGAIA RTRKARHRRG  120
IHGEELPIKG ILTETPENDG FHWRKYGEKK ILNAVFPRSY YRCGYSDEHE CPAKKHVQQQ  180
NNSDPPMFIV TLFNDHTCSA LFPANEQLPS TSNSATANSQ VLDFTKASLS SAPGISRLKK  240
EDGAGLSVTV PSYTYDELSS YSSLPLLSPT EWKMEMEIKS FFHHHTGGGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193100GGRRSGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_57051.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177383.11e-158WRKY transcription factor 55-like
TrEMBLA0A287G3R30.0A0A287G3R3_HORVV; Uncharacterized protein
STRINGMLOC_57051.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-18WRKY family protein