![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_5684.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
bHLH |
Protein Properties |
Length: 210aa MW: 23013.1 Da PI: 9.631 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_5684.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Hvu&pid=MLOC_5684.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 25.3 | 2.7e-08 | 27 | 77 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
a +e+Er RR++++ ++L +l+Pk +++ ++ L +A YIk+L
MLOC_5684.1 27 ARKEVERERRQHMKVLCAKLFSLIPKeH--LSNTNtVTQLGSLDEAASYIKKL 77
779***********************54..677777***************99 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MEMQAKEPRG GKRSRMSGGT TAARVVARKE VERERRQHMK VLCAKLFSLI PKEHLSNTNT 60 VTQLGSLDEA ASYIKKLKER IDELHNRRNS AQAMVAARGA SGASTPTTTP TTSGGKGSTE 120 GEKHWEASAP VVEVRQHDDT SMDVVLVCST ERPIMLHQVI TILEEEGAEV VNANHSVAGH 180 QIFYTIHSRA FSSRIGIDVS SVSERLRALV
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353822 | 0.0 | AK353822.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1003A14. |