 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_56821.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
G2-like |
| Protein Properties |
Length: 382aa MW: 40216.3 Da PI: 8.5769 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_56821.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 97.6 | 9.2e-31 | 29 | 82 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWt+ LH++Fv+a+++LGG+++AtPk++l+lm+v gLt++hvkSHLQ+YR
MLOC_56821.1 29 PRLRWTSALHRCFVHAIHSLGGHDRATPKRVLQLMGVGGLTISHVKSHLQMYRN 82
8****************************************************5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MTMAPRTASR EANCAGAGGV RQYNRSKVPR LRWTSALHRC FVHAIHSLGG HDRATPKRVL 60
QLMGVGGLTI SHVKSHLQMY RNMKNDLGMQ GRMQPAVQQS SGQEGHTRSA GGCMEVCTDE 120
DEEWHVPGYD SPMPRKESTP LPLHPQLKRR AGESEPGTGT REEASASPTS LLRVQGGGGI 180
CESSSSHAPA AGGNYYLRMN MNMVQEQAVL QAAPVAAARL VEPRGLTALG IQQKQRQRRG 240
PWMPARLHGG GDGEPAASEL KFLGFLVAPG HPPRAASRCD GHPFEVGTPP TRPAAHGASL 300
TDGAHPCRLE PPGNLVDGGF TNPMSTTVAG ERDGGCSLSL SLALALCPAA DGSLLSSSLS 360
SSSSSSCGSR ISLDLSLSTL DS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-16 | 30 | 84 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-16 | 30 | 84 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-16 | 30 | 84 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-16 | 30 | 84 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT068910 | 7e-66 | BT068910.1 Zea mays full-length cDNA clone ZM_BFc0191L18 mRNA, complete cds. |
| GenBank | HQ858702 | 7e-66 | HQ858702.1 Zea mays clone UT1158 G2-like transcription factor mRNA, partial cds. |
| GenBank | KJ726813 | 7e-66 | KJ726813.1 Zea mays clone pUT3230 G2-like transcription factor (GLK48) mRNA, partial cds. |
