 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_56648.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 198aa MW: 21508.2 Da PI: 10.5798 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_56648.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 53.9 | 3.1e-17 | 81 | 136 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--H.HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsa.eereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++t+eq Le+ F+ ++ +s+ e+ +LA++lgL+ rqV vWFqNrRa+ k
MLOC_56648.1 81 RKKLRLTEEQAALLEKSFRAHNVLSHvGEKHDLARQLGLKPRQVEVWFQNRRARTK 136
788899**************888886379*************************98 PP
|
| 2 | HD-ZIP_I/II | 109.5 | 2.4e-35 | 81 | 170 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLep.erKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+kk+rl++eq++lLE+sF++++ L++ +K++lar+Lgl+prqv+vWFqnrRARtk+kq+E d+e L+r++++l+++n+rL++e +e r+
MLOC_56648.1 81 RKKLRLTEEQAALLEKSFRAHNVLSHvGEKHDLARQLGLKPRQVEVWFQNRRARTKLKQTELDCELLRRWCERLSDDNARLRSELAEARA 170
69********************9986379*******************************************************988765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MSSLTTLSSG SKESLEAEEL VDTRLSLVIG AGSQPPPAPK AAGHVPRNTA RGQHGKRARA 60
VHGGSDVDDD DGGHDAAGRA RKKLRLTEEQ AALLEKSFRA HNVLSHVGEK HDLARQLGLK 120
PRQVEVWFQN RRARTKLKQT ELDCELLRRW CERLSDDNAR LRSELAEARA VLLVGRAQGS 180
SLTGCPSCSR LAGGRRAA
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 78 | 84 | RARKKLR |
| 2 | 130 | 138 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
