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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_53640.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
MYB |
Protein Properties |
Length: 332aa MW: 36045.4 Da PI: 4.7126 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_53640.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.1 | 3.6e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEd +l+ +++++G +W++ ++ g+ R++k+c++rw +yl
MLOC_53640.1 16 RGSWTPEEDMRLIAYIHKYGHANWRALPKQAGLLRCGKSCRLRWINYL 63
89******************************99************97 PP
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2 | Myb_DNA-binding | 54.6 | 2.6e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T eE++ l++++++lG++ W++Ia++++ gRt++++k+ w+++l
MLOC_53640.1 69 RGNFTVEEEDTLIKLHNMLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114
89********************.*********.************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IHKYGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTVEEEDTL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA 120 SAGEHKKPGP KTKKKTTCAA PSPSPSPSSS TTTATTTTTN CSSGESGEQS NTSSKEPEPE 180 LDKIEIPMLD LGFDIDIDML LDAVPETHCP AVSSAATSSC TSASPPCVAD DDDALLDLPE 240 IDIVPELWSI MDGACVETAQ APWGNAAPCQ GNGAEATADE DDGKEWWLED LEKELGLWGP 300 IEDYQHQQQP DPLGRVGPLS ASVDDPVSCY FS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that regulates positively genes involved in anthocyanin biosynthesis such as A1. {ECO:0000269|PubMed:7920701}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK248649 | 0.0 | AK248649.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf178a22, mRNA sequence. |
GenBank | AK369689 | 0.0 | AK369689.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2095N02. |