 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_53577.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
ERF |
Protein Properties |
Length: 288aa MW: 31337.1 Da PI: 9.8964 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_53577.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.7 | 6.8e-19 | 109 | 158 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr++ +g+WvAeIr p + r r++lg+++++e Aa a+++a+ +l+ge
MLOC_53577.1 109 YRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDSPETAAHAYDRAAYRLRGE 158
9****999.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MDASLRTLSP SSFTGEVRSA VSSLLLSPGG ASALDTVFSH LPPPVTIPPL GSSVYYRQSE 60 LLRTFAATHH QASAAAATSS SSGYAVPFPF PGAAAHDAAA AAAAGRKMYR GVRQRQWGKW 120 VAEIRLPQNR VRVWLGTYDS PETAAHAYDR AAYRLRGEYA RLNFPGVMDG ADDARFPDAL 180 RHLRDAVDAK IQAIRVRMAR KRARARRLRE ESKQQQQQNN TQRAEAAPVA PTAPRPVVSE 240 SATTSETTTT TTSSYGSPEG VLSAADFECS LQQMPSFDPE LIWEMLNF
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK374132 | 0.0 | AK374132.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3055F04. |