 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_53526.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
C2H2 |
Protein Properties |
Length: 422aa MW: 46108.3 Da PI: 6.7158 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_53526.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 19.3 | 3e-06 | 180 | 202 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C+ Cgk F+r nL+ H+r H
MLOC_53526.1 180 HCCKVCGKGFKRDANLRMHMRGH 202
569******************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MCSSDHFASN NHLYLQHNHQ RLPGTTGAME ACDLERIGHE QSRHGQEAEE HRPSDSGPSA 60 ALTTYLTFLE HKIGHLRGIL CSTPRHPQQQ RAIVSAELRC IIVQLVSIAN DLASDSSTGG 120 TVDASPSEPR EERSPSPSNG THDDSDEHAG AGDGEEEEEG EGPYEVVQIE KEEILAPHAH 180 CCKVCGKGFK RDANLRMHMR GHGDQYKAPG ALARHGSPAP APVAGRRFFY SCPYAGCKRN 240 REHRDFQPLK TPVCVKNHYR RSHCDKSHVC RRCGVKRFSV LADLRTHEKH CGRDRWVCSC 300 GVSFSRKDKL FAHVAVFDSR HTPALPPSDD EAIGHCNIAP ATTTATHSIV PSSDRLLPAG 360 GVEAVNLMDQ SFSGQMLDGL SCSGDKGAMD DGRPKLSSPI GNDFCDFDGF DLLGAVAMDF 420 NF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK366708 | 0.0 | AK366708.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046B02. |