 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_51238.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
CO-like |
| Protein Properties |
Length: 247aa MW: 25161.9 Da PI: 7.4604 |
| Description |
CO-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_51238.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 18.5 | 4.1e-06 | 14 | 56 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
C+ ++ + l+C + lC C + H+ H++vpl
MLOC_51238.1 14 ACAVCGGS-AALYCPADAAALCVPCDAAVHSAnplasrHERVPL 56
6*****99.*********************66999999999986 PP
|
| 2 | CCT | 69.6 | 8e-24 | 164 | 207 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R+a+++RY+eKrk+RkF K+irY+sRKa+Ae RpRvKGrFvk++
MLOC_51238.1 164 RAARVMRYREKRKNRKFHKTIRYASRKAYAEARPRVKGRFVKRP 207
99****************************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MESEGSTSAN GGAACAVCGG SAALYCPADA AALCVPCDAA VHSANPLASR HERVPLAAAV 60
AVAATSGVYD GLFAADDEGA ASWPTPVQGS PNSGSSGFSN GSGVEVSLFD LLSDVDLVAT 120
GAGGSVSSDG GVAPLWLQPG LVSAAWNSSW SASEAVVVPS PADRAARVMR YREKRKNRKF 180
HKTIRYASRK AYAEARPRVK GRFVKRPAAA ATDDGNTSAA EAAKFWLSFS DNSVGFHVAS 240
HGVVPSF
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK365898 | 0.0 | AK365898.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038L04. |
