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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_51079.4 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
Trihelix |
Protein Properties |
Length: 302aa MW: 34282.4 Da PI: 6.2499 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_51079.4 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 62.1 | 1.3e-19 | 13 | 93 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ +++Li+++++++++lrrg+lk+++We+v++ + +g +++ +qC++k+e+l+kry+ ++++ s +p+f+++e
MLOC_51079.4 13 WSHGDTMHLIDVYEDRWTKLRRGQLKAHQWEDVAAEVthLCGGQRKTGTQCRHKLEKLRKRYRTEAARPVT------SLWPFFRRME 93
*************************************8888999********************9998885......68*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MEAARKSAPG QPWSHGDTMH LIDVYEDRWT KLRRGQLKAH QWEDVAAEVT HLCGGQRKTG 60 TQCRHKLEKL RKRYRTEAAR PVTSLWPFFR RMERLERGPV PTATNSFAAS PPHSDDDHDH 120 HHLEEDQGLE EDQEEEEDEE XXXXXXEEEE EEEQLLVARN STRSINGLVR DGGGFRGGFA 180 PRQQSPPAVT LSTAPPRKRV SYEAAAFQSK AAAAERIKAE EAPAVDSHSV AGVLRDIGEG 240 IKRLERRRME VQWEIERGWK ETEARNNQML QDAQRQLHDA LAALPPLAKK ARRDNSSSAD 300 GL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK367324 | 0.0 | AK367324.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2054N18. |