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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_51005.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
HRT-like |
Protein Properties |
Length: 400aa MW: 43888.5 Da PI: 9.9178 |
Description |
HRT-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_51005.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HRT-like | 56 | 6.7e-18 | 154 | 184 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31
+CGv+ledGs C + P++gRKRCe HKG+R+
MLOC_51005.1 154 VCGVMLEDGSSCLEDPMEGRKRCELHKGRRV 184
7*****************************7 PP
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2 | HRT-like | 27.8 | 4.2e-09 | 316 | 341 | 2 | 28 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKG 28
CGv +++G Ck +Pv gR RCeeH G
MLOC_51005.1 316 CGVVTDNG-YCKLEPVIGRERCEEHRG 341
*******9.6***************98 PP
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3 | HRT-like | 49.8 | 5.8e-16 | 361 | 390 | 1 | 30 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30
+CG++ +dGs+Ck+qP+ RKRC+ HKG+R
MLOC_51005.1 361 VCGARASDGSPCKNQPIARRKRCALHKGQR 390
7****************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MGSKKAAEKT EGQLLGVFDY AWNKLQNGAC RREEILLKLE QGSNRLSLLS RVRHLKQRVF 60 GEKAGIKINS SGSVEISSSS MKNMLPRVRT FVGFRPRLVN SGDDLNEASD IHRKCTPQAN 120 TAGKQAHRRS EGYKVKKIDV IKRRTAPIRE AEAVCGVMLE DGSSCLEDPM EGRKRCELHK 180 GRRVRVAYSR KVSSSSSTCQ VAIPTVESIP QQTANPSKRD QAWQTSADQS KNLSTNAKEP 240 SWQRNSFKAN EMKIGEAPTE DEAYGTSHAE SQFHEDEPCG RKWFERLKAQ KSANAPSSRG 300 QGCQPREANN DASALCGVVT DNGYCKLEPV IGRERCEEHR GIEVTGASSA PCSGRSVLPS 360 VCGARASDGS PCKNQPIARR KRCALHKGQR ACCASAPSVK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ001317 | 0.0 | AJ001317.1 Hordeum vulgare Hotr1 gene. |
GenBank | AK252040 | 0.0 | AK252040.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf148d05, mRNA sequence. |
GenBank | AK362734 | 0.0 | AK362734.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2009M06. |