 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_44531.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
Trihelix |
| Protein Properties |
Length: 215aa MW: 23996.3 Da PI: 8.4822 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_44531.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 27.6 | 7.7e-09 | 14 | 99 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ e+ aL++a m r +++ l+ W+ v +++ + f+rs +qC++++ l+ +y+k+ + + +s +++f+ql+
MLOC_44531.1 14 WSDGETSALVDAWGPMYLRRNQNPLAVEEWRVVCSAVnaqraaEGCRFNRSLVQCQKRIYTLKDQYQKELAKGRP-----TSGWRHFTQLR 99
*************************************999954445569******************99877775.....35699999997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MPSSKKSPGA RGPWSDGETS ALVDAWGPMY LRRNQNPLAV EEWRVVCSAV NAQRAAEGCR 60
FNRSLVQCQK RIYTLKDQYQ KELAKGRPTS GWRHFTQLRA FLADSPPGFA TKTTAASGKK 120
EKEEEVEEAS PCFPETKPAT DKNEEVVGCG CELVGSVRCC PAATVTKLAE VYERVEMKRL 180
GVKEKEMEME KNTISRCILG HKKMKVENPE ETHGN
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G05550.1 | 1e-09 | sequence-specific DNA binding transcription factors |
