 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_44455.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
WRKY |
| Protein Properties |
Length: 308aa MW: 32700.5 Da PI: 7.0068 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_44455.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 83 | 2.9e-26 | 125 | 186 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK++ g+ +pr+Y+rCt++ gC + k+v+r++ dp +++++Y+g+H++
MLOC_44455.1 125 LDDGFSWRKYGQKDILGAMYPRAYFRCTHRhtqGCYASKQVQRAHGDPLLFDVVYHGNHTCA 186
59***************************98999**************************96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction |
| GO:0010150 | Biological Process | leaf senescence |
| GO:0010193 | Biological Process | response to ozone |
| GO:0010200 | Biological Process | response to chitin |
| GO:0031347 | Biological Process | regulation of defense response |
| GO:0042542 | Biological Process | response to hydrogen peroxide |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0009507 | Cellular Component | chloroplast |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MEQRCALATE LAQVLDTVRQ LEAHMGVKGG ADGGETCRAL VSSMRSSVDR SIHIAMSSCC 60
VEGRVLGAPE SPPSADGSPR SGGSDQAADS PCRGAHAAGQ SKKRKTLPKW STQVRVNSVE 120
DVGPLDDGFS WRKYGQKDIL GAMYPRAYFR CTHRHTQGCY ASKQVQRAHG DPLLFDVVYH 180
GNHTCAQGKH CNSQRPQPAA SGEHWQPQPA GGQEQISVGQ KTGGGAPGVA APFSFPSKQA 240
GADTGSDFPA GCAITASPFM SPATPECKVS CRNVPDVELS STTESPMGEM DFMLQLADAD 300
FLDNSRYL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK356339 | 0.0 | AK356339.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1033G17. |
| GenBank | AK357930 | 0.0 | AK357930.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1065C13. |
