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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_43923.3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
FAR1 |
Protein Properties |
Length: 443aa MW: 51488.9 Da PI: 9.4075 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_43923.3 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 47.1 | 7.9e-15 | 75 | 154 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
++Yn Y+ e+GF vr ++s+ + + + +++fvC + g++ +++++ +tr+gC a ++v +++d+ w++ + +++HnH+l+
MLOC_43923.3 75 EYYNLYSWECGFGVRYAESRLNVHRT-KCTQEFVCACAGRPLQTNSR---------STRCGCLALMRVLRSEDKDWYICEHKTDHNHALS 154
69****************99995555.67789*******99986555.........9******************************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MREDGDAESV VVNNSKGSCW TRRVRVGNTS EDRDPNPTRV PALEASMRAY TDNKADTVVN 60 PALGTSFDSV EEAYEYYNLY SWECGFGVRY AESRLNVHRT KCTQEFVCAC AGRPLQTNSR 120 STRCGCLALM RVLRSEDKDW YICEHKTDHN HALSVNCMEK LHWKSHRHID RYTRDLVKQL 180 RENNISLSKV YSVVGSFFGS VKEVPFTKRS LKTLCGKLSR EQSENDATKT IEVFNAMRAE 240 DPEFKYSVQV DDDGRVKTLM WTTGRSIEQF KCFGDDVTFD TTYKINLYDM PFGLFVGVNN 300 HFQSIIFGGV LMSDEKIDTF KWIFTEFFQM IGAPQPRTML TDQARAMEVA IEDVMKHTIH 360 RWCKWHVLKK AKECLGPLLG KGMNSSRSST RWCTMLSVRK SLRMVGRVWL RIMVYRKIRF 420 SPRYRRHEKS GLSHILWMYS VRR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK359093 | 0.0 | AK359093.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1089E14. |