 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_43438.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
bHLH |
| Protein Properties |
Length: 303aa MW: 32553.5 Da PI: 7.9182 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_43438.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 30.2 | 8.2e-10 | 105 | 152 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq
MLOC_43438.1 105 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 152
8*************************9....677*****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MALKGASDGN ARKRKAAGGS KGKGKDASVS TTSAKDLLAK EDSSSKRCKS MSMEDGEENS 60
GKGKAAQSSS ENGGKKQGKD GASKLPEPPK DFIHVRARRG EATDSHSLAE RVRREKISQR 120
MKLLQDLVPG CNKVVGKAVM LDEIINYVQS LQRQVEFLSM KLATVNPQLD FNNLPNLLAK 180
DMQQQSCGQL QQGSSHFPLE ASGAALPYMG QGNNDHLGGC GMSDGGMGDD QGAMHPLDQA 240
FCRPMGSQQQ QQHFLSDAAS QVGAFWQDLQ SVVQMDMGQS QEIATSSNSY DGSLQTVHMK 300
MEL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK354628 | 0.0 | AK354628.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1009E13. |
| GenBank | AK361938 | 0.0 | AK361938.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2001G10. |
