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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_37477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bHLH | ||||||||
Protein Properties | Length: 107aa MW: 12028.5 Da PI: 7.5139 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.3 | 4.2e-06 | 37 | 84 | 1 | 52 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 ++ + erE+ Rd++N+ f eL ++l ++ + Ka++L A + ++ MLOC_37477.1 37 KKNHKAEREKLKRDQLNDLFVELSSMLDHD----RQNSGKATVLGDAARVLR 84 5677899********************997....344556666666666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 3.6E-9 | 34 | 104 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.83E-11 | 34 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.429 | 36 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.5E-4 | 37 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0039 | 42 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MVADAESSDS MAGSSRSAAE KHVDRCLDKR AQEKAPKKNH KAEREKLKRD QLNDLFVELS 60 SMLDHDRQNS GKATVLGDAA RVLRDLITQV ESLRKEQSTL LTECQYV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress. {ECO:0000269|PubMed:25617318}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_37477.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020191318.1 | 2e-66 | transcription factor bHLH47-like | ||||
Refseq | XP_020191373.1 | 2e-66 | transcription factor bHLH47-like | ||||
Refseq | XP_020191427.1 | 2e-66 | transcription factor bHLH47-like | ||||
Swissprot | Q69V10 | 1e-27 | BH062_ORYSJ; Transcription factor BHLH062 | ||||
TrEMBL | A0A453HXV5 | 6e-65 | A0A453HXV5_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453HXV8 | 5e-66 | A0A453HXV8_AEGTS; Uncharacterized protein | ||||
STRING | MLOC_37477.1 | 8e-72 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12959 | 21 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.3 | 1e-23 | bHLH family protein |
Publications ? help Back to Top | |||
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