 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_36942.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
NAC |
| Protein Properties |
Length: 402aa MW: 42831.8 Da PI: 5.2728 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_36942.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 157.5 | 5.4e-49 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppG+rFhPtd el +yLk+k+ gkkl++ ++++evdiyk+ Pw+Lp k ++ +++ +wyfF++r +ky+ g r+nr+t+ gyWkatgkd++v+
MLOC_36942.1 6 LPPGYRFHPTDVELTLYYLKRKLLGKKLHC-NTVAEVDIYKFPPWELPaKsSMPTGDLQWYFFCTRGRKYSVGYRTNRSTEGGYWKATGKDRQVVY- 100
79****************************.88***************4246666888**************************************. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vg+k+tLvf+ g+apkg++tdWvm eyrl
MLOC_36942.1 101 ENRTVGMKRTLVFHAGKAPKGTRTDWVMYEYRL 133
9999***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MDMPPLPPGY RFHPTDVELT LYYLKRKLLG KKLHCNTVAE VDIYKFPPWE LPAKSSMPTG 60
DLQWYFFCTR GRKYSVGYRT NRSTEGGYWK ATGKDRQVVY ENRTVGMKRT LVFHAGKAPK 120
GTRTDWVMYE YRLAQGEIPD AGARLDDSVL CKVHKKSGLG PKIGEQYGVP FEEVEEELND 180
AKGDASCLSP SAPPAAPQSA SGPSRGDVLN SAGEQLVSLS LSPSNNGESA ASGARPDRAS 240
CPDVNWDSIH VHQLADIIGH ISTNPVGQDG PSSDLTTANQ DTEALSDNSE SIFDIAHQVV 300
PSSLGSSLCK QCDKCGVRLV DPLLEPVAGE PYVELNDLLS RCGAAGHVRD GSSSQAVVLS 360
NGEGPPLDLE LKLGLGLESC DSVGHSSGAV SAAASGSGAP SS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-48 | 6 | 157 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-48 | 6 | 157 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-48 | 6 | 157 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-48 | 6 | 157 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 2e-48 | 6 | 157 | 20 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-48 | 6 | 157 | 17 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-48 | 6 | 157 | 17 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK370777 | 0.0 | AK370777.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2116L22. |
