 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_34252.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
CO-like |
Protein Properties |
Length: 279aa MW: 29506.8 Da PI: 5.0536 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_34252.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 24 | 7.9e-08 | 20 | 65 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
+ C+ +e+ ++ C+ + lC++C +H+ H++ p+
MLOC_34252.1 20 VWLCEVCEHAPAAVTCRADAAALCATCDADIHSAnplasrHERLPI 65
679*****************************66889999998776 PP
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2 | CCT | 69.3 | 9.9e-24 | 204 | 247 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+l+RY+eKrk+R+F+K+irY+sRKa+Ae+RpR+KGrF+k++
MLOC_34252.1 204 REARLMRYREKRKNRRFQKTIRYASRKAYAETRPRIKGRFAKRT 247
9****************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
PLCAGCDARA HGAGSRHARV WLCEVCEHAP AAVTCRADAA ALCATCDADI HSANPLASRH 60 ERLPITPFFG ALADPPQPVP SPSSAAATQE DAEDDGSNEA EAASWLLPEP GDSPEDSAAT 120 FFADSDAYLD LDFVRSMDGI KAIGVPVAPS ELDLAGGTLF YPEHSMNHSM STSEVAVVPD 180 ALSAGGAPAP APSVAVVASK GKEREARLMR YREKRKNRRF QKTIRYASRK AYAETRPRIK 240 GRFAKRTAED DALEQDGPFS PASSAHLASD GDYGVVPSF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK368809 | 0.0 | AK368809.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2080E22. |