 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_16989.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
GRAS |
| Protein Properties |
Length: 323aa MW: 35755.8 Da PI: 5.2568 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_16989.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 311.4 | 2e-95 | 18 | 323 | 71 | 374 |
GRAS 71 eknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetger 164
+ s+e++ +k++++++P+ kf+hltaNqaIlea+ ++++Hi+Df+i +G+QW+aLlqaLa+Rpeg+p ++Ri gv sp g + +l +t r
MLOC_16989.1 18 RLASDEVTLCYKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVHGIQWAALLQALATRPEGKPsRIRISGVPSPYLGpqPAASLAATSAR 114
2338899999********************************************************887769********998898999******** PP
GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
L++fA+ lgv+fef + + + +++l+l++++v+p+E++aVn++lql++ll ++++++ ++vL+l ksl P vv++ e e+++n++ F++rf++al
MLOC_16989.1 115 LRDFAQLLGVDFEFVP-LLRPVHELDLSDFSVEPDEVVAVNFMLQLYHLL---GDSDEPVRRVLRLAKSLGPAVVTLGEYEVSLNRAGFVDRFASAL 207
****************.599******************************...66666777************************************ PP
GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesg 356
+yy +f+sl++ ++r+se+r ++Er ++g++i+ +v ega+r+ r+ ++W++ +e +GF+pv+ls++a++qa+lll ++ + y++ e
MLOC_16989.1 208 SYYRCVFESLDVAMARDSEDRLTLERCMFGERIRRAVGpPEGADRKDRMAGSGEWQALMEWCGFEPVRLSNYAESQAELLLWDYDsKYKYSLVELPP 304
*************************************83699*******************************************777899999999 PP
GRAS 357 slv.lgWkdrpLvsvSaWr 374
+++ l W +rpL++vSaWr
MLOC_16989.1 305 AFLsLAWDKRPLLTVSAWR 323
9988**************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
ACRGAARAPL DTASSDARLA SDEVTLCYKT LNDACPYSKF AHLTANQAIL EATGAATKIH 60
IVDFGIVHGI QWAALLQALA TRPEGKPSRI RISGVPSPYL GPQPAASLAA TSARLRDFAQ 120
LLGVDFEFVP LLRPVHELDL SDFSVEPDEV VAVNFMLQLY HLLGDSDEPV RRVLRLAKSL 180
GPAVVTLGEY EVSLNRAGFV DRFASALSYY RCVFESLDVA MARDSEDRLT LERCMFGERI 240
RRAVGPPEGA DRKDRMAGSG EWQALMEWCG FEPVRLSNYA ESQAELLLWD YDSKYKYSLV 300
ELPPAFLSLA WDKRPLLTVS AWR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (By similarity). Binds DNA in vitro (PubMed:27081181). {ECO:0000250|UniProtKB:A0A024B7I0, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:27081181}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK353654 | 0.0 | AK353654.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1001N07. |
