 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_16514.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
GRAS |
| Protein Properties |
Length: 353aa MW: 37531.2 Da PI: 8.6526 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_16514.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 235 | 3.3e-72 | 5 | 352 | 18 | 374 |
GRAS 18 elaqalLarlsel....aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleave.g 108
+ a+++Larl+++ +p g p+ R+aa + AL +rl+ +a p+s s+ +++ +laa+k++ ++sP+++f+ +t qa l+a+ g
MLOC_16514.1 5 AGAREILARLNHRlpspPAPPGhPPLLRAAALLRDALLHRLLP-----PAAGPCSVLSPLDVALKLAAHKALADASPTVQFAGFTSTQAFLDALGaG 96
5699********9965533344369******************.....555688888888899******************************9625 PP
GRAS 109 eervHiiDfdisqGlQWpaLlqaLa..sRp.....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
++rvH++Dfd++ G++Wp+L+q+La R+ +pp+l++T+++sp s + el+ t+e La+fA+elg+pfef +++ + ++ + L+ p
MLOC_16514.1 97 ARRVHVVDFDVGFGGHWPPLMQELAhhWRRtaapsTPPPTLKVTALVSPGSRHPLELHLTQESLARFAAELGIPFEFAAVAFDPFSPSPPPGLSAAP 193
6************************54233577777799*****************************************99*************** PP
GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
+Ea+aV++ + ++ ++++ L++vk+l+P +vv+v++ +d+ + ++ + l+ l+ ++al +sl++ ++ + +kvE+++l+++++
MLOC_16514.1 194 DEAVAVHITVGTETSR--------PTPASLRVVKQLRPAIVVCVDHGCDRADLPLRSHALNVLRSCAALVESLDTP-GASLDVVAKVEQFVLRPRAE 281
*********9777765........66789*********************************************99.5666999************* PP
GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+v+ +l Wr+ + + GF+p+pls+ a++qa++llr+++++g++ve+++ +l l W++ +LvsvSaWr
MLOC_16514.1 282 RLVTGGD--------KLPPWRSTFASTGFTPLPLSNAAEAQAECLLRRTANHGFHVEKQQSALALWWQRSELVSVSAWR 352
**97543........48*************************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
AGAPAGAREI LARLNHRLPS PPAPPGHPPL LRAAALLRDA LLHRLLPPAA GPCSVLSPLD 60
VALKLAAHKA LADASPTVQF AGFTSTQAFL DALGAGARRV HVVDFDVGFG GHWPPLMQEL 120
AHHWRRTAAP STPPPTLKVT ALVSPGSRHP LELHLTQESL ARFAAELGIP FEFAAVAFDP 180
FSPSPPPGLS AAPDEAVAVH ITVGTETSRP TPASLRVVKQ LRPAIVVCVD HGCDRADLPL 240
RSHALNVLRS CAALVESLDT PGASLDVVAK VEQFVLRPRA ERLVTGGDKL PPWRSTFAST 300
GFTPLPLSNA AEAQAECLLR RTANHGFHVE KQQSALALWW QRSELVSVSA WRC
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK364580 | 0.0 | AK364580.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2026L07. |
