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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_16429.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
bHLH |
Protein Properties |
Length: 238aa MW: 25459.8 Da PI: 6.4171 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_16429.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 25.3 | 2.8e-08 | 164 | 204 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r RR+ri +++ L++l+P +K++ a++L +A++Y+k L
MLOC_16429.1 164 ARLRRERISERIRVLQRLVPGG-----TKMDTASMLDEAIHYVKFL 204
699*****************87.....8****************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010500 | Biological Process | transmitting tissue development |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0048462 | Biological Process | carpel formation |
GO:2000012 | Biological Process | regulation of auxin polar transport |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MDFDLLMSSS PEAQLALMNT MLQLEQALND QSLMMAEASP PISPAQTPSH SLSPPPHVST 60 ACAPTDAGYF YHQDMHAQAA AAGYADAGTG GVHQEYVVSP GAVVFDGPTG APQGYSSSPS 120 SSDAMREMIF HIAALQPVDI DPEAVRPPKR RNVRTSKDPQ SVAARLRRER ISERIRVLQR 180 LVPGGTKMDT ASMLDEAIHY VKFLKSQVQS LELAAAATGA AAHRAAAFAY PALQHAPW
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 145 | 150 | RPPKRR |
2 | 164 | 169 | RLRRER |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK369960 | 0.0 | AK369960.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2102B12. |