PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_14844.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 280aa    MW: 30846.9 Da    PI: 8.6306
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_14844.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.81.2e-332377155
       G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                  kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYR+
  MLOC_14844.3 23 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRM 77
                  79****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-322078IPR009057Homeodomain-like
PROSITE profilePS5129413.7162080IPR017930Myb domain
TIGRFAMsTIGR015571.7E-242378IPR006447Myb domain, plants
SuperFamilySSF466891.43E-162379IPR009057Homeodomain-like
PfamPF002498.6E-102576IPR001005SANT/Myb domain
PfamPF143798.9E-25122166IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MFEGMERAGY GVGAGVVLSR DPKPRLRWTP DLHERFVEAV TKLGGPDKAT PKSVLRLMGM  60
KGLTLYHLKS HLQKYRMGKQ SKKDTGFETN RGAFAAQGIS FSSAVPPNAP SAGNSNMGET  120
PLADALRYQI EVQRKLHEQL EVQKKLQMRI EAQGKYLQTI LEKAQKNLSY EAGGDANLET  180
TRSQLTDFNL ALSGFMDDAT QACQQNDGEL AKALSEDSLR AGNLGFQLYH GVQDGEDVKC  240
ATDEDLLLLD LNIKGGYDHR LSSHGMRRGA VDLAVGQHRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-212379157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-212379157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-212379157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-212379157Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00544DAPTransfer from AT5G45580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_14844.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3569260.0AK356926.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1042E14.
GenBankAK3660410.0AK366041.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2039P18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020170372.10.0myb family transcription factor PHL11-like
SwissprotC0SVS45e-65PHLB_ARATH; Myb family transcription factor PHL11
TrEMBLF2CZ700.0F2CZ70_HORVV; Predicted protein
STRINGMLOC_14844.30.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39403470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.18e-66G2-like family protein
Publications ? help Back to Top
  1. Petridis A,Döll S,Nichelmann L,Bilger W,Mock HP
    Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation.
    New Phytol., 2016. 211(3): p. 912-25
    [PMID:27125220]