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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_13305.5 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
ERF |
Protein Properties |
Length: 263aa MW: 28730.5 Da PI: 9.4532 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_13305.5 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.5 | 7.7e-19 | 46 | 93 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+G+r+++ +g+W+AeIrdp + +r++lg+f+ta++Aa+a++ a+++l+g
MLOC_13305.5 46 HGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFDTADDAARAYDVAARRLRG 93
7******.**********72....35*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MKRTRFTAVG SWYHGRGRLM RFLFAAYDGG RAAHAASRKK RTGHLHGIRQ RPWGKWAAEI 60 RDPHKGTRVW LGTFDTADDA ARAYDVAARR LRGSKAKVNF PDAARTGARP RRASRRTAQK 120 PQCPPARTTA YSATAAARAQ PEQDAMMVKP ELMEFFNVDA IVHLTTAVAA LPPVTASTFA 180 DTMPRVDEDS SVGSGGGAML GFADELGFDP FMMFQLPCSD MYESADSIFA GDAVIPDALS 240 VDSGMDAVSL WSFDEFPMDS AIF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ102384 | 0.0 | DQ102384.2 Hordeum vulgare root abundant factor (RAF) gene, promoter region and complete cds. |