|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MLOC_13159.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
bHLH |
Protein Properties |
Length: 246aa MW: 26954 Da PI: 9.1388 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_13159.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.5 | 5.7e-14 | 60 | 106 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h ++Er+RR++iN++f eL ++P + kK++K +iL A+ Y+k+Lq
MLOC_13159.1 60 DHIMAERKRREKINQRFIELSAVIPGL-----KKMDKGTILADATTYVKELQ 106
699************************.....9******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MSSTGTSNTL SMSWNFGAVL PPQPVSSSGG GMIAARAPLG SAVSQPTRRT SKKSTPYAQD 60 HIMAERKRRE KINQRFIELS AVIPGLKKMD KGTILADATT YVKELQERVK YLEAAGGNHR 120 SVETVVLVTK PQCLVAPDNE ACPGSFLAAG TPARRELLPE IEAKFSEDNM MVRIHCEMNG 180 KGLVARVLAE VEELHLRIVH NDVMPFTAST VIITTMAKVE EGFTVKREEI VGRLNSVLYQ 240 HSSNNY
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 47 | 53 | RRTSKKS |
2 | 64 | 69 | ERKRRE |
3 | 65 | 70 | RKRREK |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK365995 | 1e-44 | AK365995.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2039J24. |