 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_12473.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
MYB_related |
| Protein Properties |
Length: 36aa MW: 3990.52 Da PI: 7.4436 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_12473.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 21.7 | 4.8e-07 | 15 | 35 | 1 | 21 |
TSSS-HHHHHHHHHHHHHTTT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGg 21
+g+WT+eEd+ lv+ +++ Gg
MLOC_12473.1 15 KGPWTEEEDKALVEHIQKRGG 35
79***************9987 PP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK243271 | 2e-36 | AK243271.1 Oryza sativa Japonica Group cDNA, clone: J100049K04, full insert sequence. |
| GenBank | AL662952 | 2e-36 | AL662952.6 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence. |
| GenBank | AL731579 | 2e-36 | AL731579.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence. |
| GenBank | AP014960 | 2e-36 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012612 | 2e-36 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |
| GenBank | CR855235 | 2e-36 | CR855235.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0142I02-OSIGBa0101B20, complete sequence. |
