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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_12058.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
bHLH |
Protein Properties |
Length: 306aa MW: 32174.6 Da PI: 7.7115 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_12058.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.6 | 4.1e-12 | 242 | 287 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L++l+P+ +k s +++L +Ave+I+ Lq
MLOC_12058.1 242 SIAERERRTRISEKLRKLQDLVPNM----DKQTSTSDMLDLAVEHIRGLQ 287
689*********************7....688****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MRRFLPAGAG EPSSSSSSGP HGKHEGSEAA AAAGGLRYGG GDISLGRGND LLHAQFRGGE 60 GEMKDDGADM LARHSSSPAG FFSNLMVDDG YHGSRGAGVA GGSGEAHRNT SSSTKMKSQL 120 SFTSGGPQTA AHLSRISEGA SLFPGADVVR AAAHSGGEHP VSRSFSASGS SGGFSIVGPW 180 DESREIIGTL DLGGYESQFS GMASSSSLEL AGMDKYMQAQ QQQDQVGFKV RAKRGCATHP 240 RSIAERERRT RISEKLRKLQ DLVPNMDKQT STSDMLDLAV EHIRGLQSQL QVMKHEQDKC 300 TCCSKP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK249954 | 0.0 | AK249954.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf51f14, mRNA sequence. |