 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_10987.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
C2H2 |
| Protein Properties |
Length: 512aa MW: 55711.5 Da PI: 5.8881 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_10987.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 20.5 | 1.3e-06 | 270 | 291 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
C +Cgk F+r nL+ H+r H
MLOC_10987.1 270 FCVICGKGFKRDANLRMHMRGH 291
6*******************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010044 | Biological Process | response to aluminum ion |
| GO:0010447 | Biological Process | response to acidic pH |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003676 | Molecular Function | nucleic acid binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 512 aa
Download sequence Send
to blast |
MKASSSMAGD ASGNTDPGQQ GVRFSSMDQS CFARPGQSIP GYPPFFGPQS SNFYLPDDSV 60
GKACDPFEPN PPVNEPIADW DPQAMLSNLT FLEQKIKQVK DIVQSMGNRG SQVGGASCEL 120
AAKQQLVTAD LTSIIIQLIS TAGSMLPSMK TPLLSSNPAV RQINTPGSTM GFGSTANQRP 180
SATREEMIPD ISKTSDYEEL MNTLNTAHDE KDDQIKCPNP CGVEGSEPVP MEDHDVKESD 240
DGGEAEHLPP GSYVVLQLEK EEILAPHTHF CVICGKGFKR DANLRMHMRG HGDEYKTPAA 300
LAKPMRDSGS DPTPVTRYSC PYVGCKRNKE HRKFQPLKTI LCVKNHYKRS HCDKRYTCSR 360
CNTKKFSVIA DLKTHEKHCG RDKWLCSCGT TFSRKDKLFG HVALFQGHTP ALPMDDIKAT 420
GASEQPQGSE AMDDMVGSTG YNFPGSTSDG VPNLDMKVAD DTRGYFSPLN FDPCFGALDD 480
FARPGFDISE NPFSFLPSGP GSCSFGQLSG DN
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK252406 | 0.0 | AK252406.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf151p02, mRNA sequence. |
