 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_10687.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
WRKY |
| Protein Properties |
Length: 334aa MW: 36662.9 Da PI: 8.9414 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_10687.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 101.7 | 4.1e-32 | 117 | 172 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
DgynWrKYGqK+vkgsefprsYY+Ct+++Cpvk+kve++ d+++ ei+Y+geHnh+
MLOC_10687.2 117 DGYNWRKYGQKQVKGSEFPRSYYKCTHPTCPVKRKVETTV-DGQIAEIVYNGEHNHP 172
9***************************************.***************8 PP
|
| 2 | WRKY | 86 | 3.4e-27 | 278 | 331 | 4 | 59 |
SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 4 gynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++WrKYGqK v+g+ fprsYYrC++a+C+++k vers+ d + +++tYeg+Hnh
MLOC_10687.2 278 AFRWRKYGQKAVNGNSFPRSYYRCSTARCNARKFVERSS-D-NSLVTTYEGKHNHA 331
69*************************************.4.567799*******7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MQSQEKITPV KPVASRPFSS FTSFSKLLED FTGTGSAQIT SLGETVIVRR PKVTRFAPPP 60
SDLSAGIAAT MFQDAGLDTT REQMVIDPEQ VVSCDQMTAF HNINKPIHSM KNRLSYDGYN 120
WRKYGQKQVK GSEFPRSYYK CTHPTCPVKR KVETTVDGQI AEIVYNGEHN HPQPHPPKKP 180
TSSASTEVLV PGAHGSNDAG AESQVGGCNL VLGSAPVATA FRSSCDCVDE FGNTSPVYHC 240
NTSRKEKQSS ITNGLTSSSE AAPAFQSPTE CESSRDAAFR WRKYGQKAVN GNSFPRSYYR 300
CSTARCNARK FVERSSDNSL VTTYEGKHNH AQLK
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ863123 | 0.0 | DQ863123.1 Hordeum vulgare subsp. vulgare WRKY transcription factor 40 (WRKY40) mRNA, partial cds. |
