PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C027103P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family G2-like
Protein Properties Length: 201aa    MW: 21750 Da    PI: 11.8715
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C027103P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.13.9e-08179196219
         G2-like   2 prlrWtpeLHerFveave 19 
                     pr+rWt++LH+rFv+ave
  MELO3C027103P1 179 PRMRWTTTLHARFVHAVE 196
                     9****************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-5177196IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MELFPAQPDL SLQISPPNSS TNSKPSSNSN WRTQPISSIS PQHPLDLMFW NHNNNNNINK  60
SFPSNNSSSN SSNFDPSLSN SSNFLSHHFP PTVNGGGAGL FHRHLHDLHP QGLGFLRPIR  120
GIPVYQNPPS SSTSSSSSSY PIFGGSGGGG GGGGSQFSYN GLRSRFLARF PAKRSIRAPR  180
MRWTTTLHAR FVHAVELGWP *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6820760.0LN682076.1 Cucumis melo genomic scaffold, unanchored_scaffold00308.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008465527.15e-92PREDICTED: probable transcription factor KAN2
TrEMBLA0A1S3CP021e-90A0A1S3CP02_CUCME; probable transcription factor KAN2
STRINGXP_008465527.12e-91(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59683452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.15e-15G2-like family protein