 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C026906P1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
Family |
MYB |
Protein Properties |
Length: 282aa MW: 31918.8 Da PI: 6.9952 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C026906P1 | genome | MELONOMICS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l++ ++ +G+g +W + +++ g++R++k+c++rw++yl
MELO3C026906P1 14 KGPWSPEEDSKLKHHIETYGTGgNWISLPQKAGLRRCGKSCRLRWLNYL 62
79*********************************************97 PP
|
2 | Myb_DNA-binding | 37.7 | 4.9e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd + +++ G++ W+ Ia+ ++ gRt++++k++w++
MELO3C026906P1 69 GEFSAEEDTVICTLFATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
789******************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKKGPWSPE EDSKLKHHIE TYGTGGNWIS LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSAEEDTVIC TLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMMG 120 MVSSSSTTNT THYAPQAEIV KTIETLSPKP HQNPSFDYQP LSNNSYEPLG SANYSIPLFN 180 YCNNPISSCL VTNPFDQNNS FYETLKPNQV GFEFDELEYG GLNSVSFNNG LLFDEKMKMM 240 QQNNNGNEGY NGNYVEGNAM MKEEEEMMEQ KREEEAKRST K*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | LN681935 | 0.0 | LN681935.1 Cucumis melo genomic scaffold, unanchored_scaffold00115. |