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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MELO3C025726P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
AP2 |
| Protein Properties |
Length: 498aa MW: 54238.8 Da PI: 6.7943 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C025726P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53.6 | 5.6e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
MELO3C025726P1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 205
78*******************......55************************997 PP
|
| 2 | AP2 | 40.9 | 5.1e-13 | 248 | 298 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k +g
MELO3C025726P1 248 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDKAAIKCNG 298
89********.7******...5...334336**********99**********99776 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 498 aa
Download sequence Send
to blast |
MFDLNLNVDS PDAAQNEDSV VFFEKLPQGS GNQMDESGTS NSSIVNADTS SNGGDDDSCS 60
TRAGGELFTF NFEILKAGSA NDVVTKELFP IGGTVNADFG ILQGHNSASS SSTSSRKNWI 120
NLAFDRSGSA GEGRTVQPVQ PQPVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180
VYLGGFDTAH SAARAYDRAA IKFRGVDADI NFNLSDYEDD LKQMKNLSKE EFVHILRRQS 240
TGFSRGSSKY RGVTLHKCGR WEARMGQLLG KKYIYLGLFD SEVEAARAYD KAAIKCNGRE 300
AVTNFEPSTY GERISEGSSE GGWNMLDLNL GISPPSLDNS PKDSEGHLRF QSGSCYANDR 360
STMMESNADA AVGDPPMKGP VITSEHAPLW NGLQTSFFPS EEIVTEKRLA LGSSQGIPPN 420
WGWQIHSQVN ATQVPLFSAA ASSGFSFSAT HFPAAIHPLC RPGSTAHNLH FTTPKASSLN 480
SPQYHDHHQL NPQQAPP*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
