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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C023549P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
MYB |
Protein Properties |
Length: 294aa MW: 33657.4 Da PI: 5.6746 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C023549P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 47 | 6e-15 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl
MELO3C023549P1 18 KGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYL 65
678*****************************99************97 PP
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2 | Myb_DNA-binding | 49.8 | 7.7e-16 | 71 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+++++E++l+++ + +lG++ W+ Ia++++ gRt++++k++w++
MELO3C023549P1 71 RGAFSPQEEQLILHFHSLLGNR-WSQIAARLP-GRTDNEIKNFWNST 115
89********************.*********.***********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MRKPAECSTA AANIRLRKGL WSPEEDEKLM RYMLSNGQGC WTDIARNAGL LRCGKSCRLR 60 WINYLRPDLK RGAFSPQEEQ LILHFHSLLG NRWSQIAARL PGRTDNEIKN FWNSTLKKRM 120 KNNRNYNIIP SPNLSHSSEL PRSSSNSFGE QSSSSKPLLF STFSDDNYQL FNTFGGGGSG 180 GGDGITEEGY FGDYTTTTIV EPKDFVRDFY DLSHLHQLEN KDIIIEEINK VPSMNNNPQQ 240 NNYELFNNID QMSFEVEDIF GNNNNCQNNQ LQDHFKIGAN WDFDPFILDF QID*
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