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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MELO3C023120P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
C2H2 |
| Protein Properties |
Length: 290aa MW: 31741.3 Da PI: 8.5393 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C023120P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.4 | 0.00049 | 223 | 245 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp C+ Fs+ s+L H + H
MELO3C023120P1 223 QCPQCSAKFSSVSSLIDHVEKvH 245
7*****************99888 PP
|
| 2 | zf-C2H2 | 15 | 7.1e-05 | 262 | 283 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23
Cp+C++ F ++ L+ Hi + H
MELO3C023120P1 262 CPKCSRGFVDPVALVEHIERdH 283
******************9988 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF118310 | 1.15E-11 | 4 | 59 | No hit | No description |
| Gene3D | G3DSA:4.10.1110.10 | 1.1E-9 | 10 | 53 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS51039 | 7.895 | 10 | 56 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 1.5E-4 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 2.1E-12 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
| Gene3D | G3DSA:4.10.1110.10 | 4.6E-10 | 91 | 144 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 1.0E-8 | 93 | 142 | No hit | No description |
| PROSITE profile | PS51039 | 7.941 | 98 | 147 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 0.064 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 5.3E-8 | 101 | 138 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS50157 | 8.85 | 222 | 245 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.027 | 222 | 245 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13894 | 3.0E-4 | 223 | 245 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 224 | 245 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 11 | 260 | 283 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 8.538 | 260 | 288 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 262 | 283 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MGTPEFPNLG KHCNFAVCKQ IDFLPFTCDC CHQVFCLEHR SYNRHSCPKA DRRDVTVVIC 60
PLCAKGVRLI PDQDPNITWE IHVNTECDPS NYDKVTKKKK CPVPGCRELL TFSNTIKCRD 120
CSLDHCLKHR FGPDHKCLGP RKLEPTGFPF VGLLNRSRKE EKGPKKALPT ASSSKWTAFL 180
NAASSVKASA EASMTKLSNE LSQTWISSGS SSNGVGGNGQ VEQCPQCSAK FSSVSSLIDH 240
VEKVHERGGN RTGAKKVVID ACPKCSRGFV DPVALVEHIE RDHGGTSRA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in environmental stress response. {ECO:0000250}. |
| Annotation -- Protein
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| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_008460764.1 | 0.0 | PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like |
| Swissprot | Q8VZ42 | 1e-126 | SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 |
| TrEMBL | A0A1S3CD86 | 0.0 | A0A1S3CD86_CUCME; zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like |
| STRING | XP_008460764.1 | 0.0 | (Cucumis melo) |
