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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C022298P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
B3 |
Protein Properties |
Length: 364aa MW: 41579.8 Da PI: 6.229 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C022298P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 96.3 | 1.9e-30 | 100 | 204 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE...E-SS. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk...ldgr. 87
f+kv tpsdv+k++rlv+pk++ae++ ++ + ++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F+ ++
MELO3C022298P1 100 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNDKGLILNFEDRHGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHraiP-SHs 193
89**************************99555567889***********************************************94322.333 PP
SEE..EEEEE- CS
B3 88 sefelvvkvfr 98
+ +l++ ++r
MELO3C022298P1 194 VNDRLFIDWRR 204
55556666666 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MNFHKQDMEF LTKSTREDQD QDQEEDEEED EDQEQDQDLV ACNFFPNSHT QLTNQQDQDQ 60 DQESGNFECQ NEDHQPILMD LSLRMESNGF VDVVEREHMF DKVVTPSDVG KLNRLVIPKQ 120 HAEKYFPLDS STNDKGLILN FEDRHGKPWR FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG 180 DIVSFHRAIP SHSVNDRLFI DWRRRRSDAP TPHHHHRHFS NPFLLRWGTT ARHLPQPPPL 240 PRRTTHHQHH LYPNYGFEIP NFGMSNINNS SMYYFRPSSS SSSLYRMGNG DELVVNNQGC 300 SSMGIINKPG SGAAKRLRLF GVNMECASPD GGGGGGGGGG EDVSNGGVPK RGKEPLSLNW 360 DLL*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-61 | 93 | 205 | 1 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-61 | 93 | 205 | 1 | 113 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Regulates lateral organ growth. Functionally redundant with NGA1, NGA3 and NGA4. {ECO:0000269|PubMed:16603651}. |