 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MELO3C021978P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 305aa MW: 33816.9 Da PI: 6.841 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C021978P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.7 | 4e-18 | 84 | 136 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k
MELO3C021978P1 84 KKRLNLEQVKALEKSFEVGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 136
4568889*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 127.6 | 5.4e-41 | 82 | 172 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekk+rl+ eqvk+LE+sFe +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlE+dye+Lk++++alk++n+ L++++++L++el
MELO3C021978P1 82 EKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYEVLKKQFEALKADNDVLQAQNTKLHAEL 172
69**************************************************************************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MASPHHHSHS FMFQSRPAPD HHEYVPSASF NTIPSCPPHL YFHDGVVPVM MKRSMSFSGV 60
ENGCEDVNGD EGLSDDGLAL GEKKKRLNLE QVKALEKSFE VGNKLEPERK MQLAKALGLQ 120
PRQIAIWFQN RRARWKTKQL ERDYEVLKKQ FEALKADNDV LQAQNTKLHA ELLALKTKDS 180
GETVGGGGAT MNLKKENERC WSSDNSCDIN LDISNTQTPI GGGGGRACSQ PGMIKDLFPS 240
AAFRSAAITQ LLQHGSSRST VDQHPQVIQE ESFSQMFNGI EEQQQTAAAA GFWPWSSDQN 300
SHFH*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 130 | 138 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
