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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MELO3C021457P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
C2H2 |
| Protein Properties |
Length: 296aa MW: 31787.8 Da PI: 4.5868 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C021457P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.2 | 6.1e-05 | 269 | 292 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C++sF + L++H + H
MELO3C021457P1 269 FSCKSCDRSFVSDGALQSHSKAkH 292
89*****************88777 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MEFWGVEVKA GQSLIVKPGN EKLIHLSQAT LGEIKKDKAS ENVTIFLKIG DQKLVLGILS 60
AEKFPQLSFD LVFEKEFELS HNGKSGSVYC AGYQAYGDDH EHDGYLDSDA GSDDEELPLA 120
SAQNGKPSSK DVKPGLVESN NAKKASLKKP LKPSKDEDDV SEDDESDDDE DSDDESDEEM 180
LEGDSGDSDE EDDDSESDEE TPKKVESAKK RLNESATKTT PLPAKKAKLA TPEKTDSKKG 240
GHTATPHPAK KTGKTPAAKL ETPKSGGQFS CKSCDRSFVS DGALQSHSKA KHGAK*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | LN681924 | 1e-122 | LN681924.1 Cucumis melo genomic scaffold, anchoredscaffold00047. |
| GenBank | LN713265 | 1e-122 | LN713265.1 Cucumis melo genomic chromosome, chr_11. |
