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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C018722P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
Trihelix |
Protein Properties |
Length: 275aa MW: 31943.3 Da PI: 10.2685 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C018722P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 48.4 | 2.5e-15 | 26 | 115 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt +++ +Li a +++ +l+rg+l+ ++W+e+++++ ++++f r+++qCk++++ l+++yk +k++ ++ e + +p+f+ l+
MELO3C018722P1 26 WTFDHTSTLIHAWGQRHLDLNRGSLRHKHWQEIADAVnsshgHDKKFFRTAIQCKNRIDTLKRKYKIEKARIQESGGEYVCAWPFFSCLD 115
****************************************999***************************99998889999*****9887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MQKPRRNHHC RLPLMPSTVP LREDSWTFDH TSTLIHAWGQ RHLDLNRGSL RHKHWQEIAD 60 AVNSSHGHDK KFFRTAIQCK NRIDTLKRKY KIEKARIQES GGEYVCAWPF FSCLDDLIGN 120 SHKASTSVSV SNSQSSPVTT PRLSLFSKVP VAPRSVIKKR RSTHVYRSFC DSYLRRDVNL 180 NEDEGKDGLE SDNSLSSSSF KDREVGYRKL AEAIRTITDI YERVEAEKQR QVVELEMQRM 240 QFTKDLEYQR MQLLLDIHLK FQKIKRARRA SEAG*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 4e-58 | sequence-specific DNA binding transcription factors |