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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C017547P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
GRAS |
Protein Properties |
Length: 512aa MW: 57138.8 Da PI: 6.3907 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C017547P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 298.9 | 1.3e-91 | 147 | 508 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
e L+++A++++s+d++la+ +L+rl+++ ++++++p++R+a++++eAL++ l+ +++ y+ + +s+++ +++++a+k+fs +sPil fsh
MELO3C017547P1 147 EDLVAAADCFDSNDFQLAHVILERLNQRlqSTSSAKPIHRAAFFIKEALQSLLSP-STNRYN----RLSSWSDIVHTIKAYKAFSSISPILMFSH 236
689************************98677777*******************9.333444....45555568********************* PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
+t+Nqa+lea++ ++ +HiiDfdi+ G+Q+++++++La+++e+ pp lRiT+v ++e + e + ++e+L +fA+ l+++f+++++ +++
MELO3C017547P1 237 FTTNQALLEALNASSFIHIIDFDIGFGGQYASFMKELAEKAESkniaPPVLRITAVMPEE--LAIESRLIRENLFQFAQDLKIRFHIDLVPLRTF 329
**************************************9994445559**********66..8899999********************9999** PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpres 279
++l++++ ++ +gE++a+ l +++r l sv++ ++L ++++sP vvv+v+ e +d +++sF + +++ le+y+++++sl+a+ +
MELO3C017547P1 330 QTLSFKSVKFMEGEKVAILLTPSIFRRLG-SVNV---VASFLTDIQQVSPCVVVFVDGEgwSDSGGASFKKNLVKNLEFYATMLESLDAT-GVSG 419
***************************93.3333...447*******************7778899*********************888.5677 PP
GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
e+ + +E ++l+++i v g + + Wre ++ aG++pv+ls++a qa++ll kv+++g++v ++++lvl+W++rpLv++SaWr
MELO3C017547P1 420 EWVRRIETFVLRPKIFATVEGGGGM------AAPPWREVFDGAGMRPVALSQFADFQAECLLGKVQVRGFQVGRRHAELVLCWHERPLVATSAWR 508
9999*****************9998......899************************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 512 aa
Download sequence Send
to blast |
MRVPVPNHQS SSLSSSTPKL HSEPTSVLDL HRTPSPVAPD NPLSSAHDRH NNHPLDWDEQ 60 ALHNLDWDSI MGDLGLHDDS NSSLKNNTSH DHVPNFPEFL HSQSLDQTSH LLPPDFFISE 120 PFSNHPPTIL QSFNSFNSNN PSLDFLEDLV AAADCFDSND FQLAHVILER LNQRLQSTSS 180 AKPIHRAAFF IKEALQSLLS PSTNRYNRLS SWSDIVHTIK AYKAFSSISP ILMFSHFTTN 240 QALLEALNAS SFIHIIDFDI GFGGQYASFM KELAEKAESK NIAPPVLRIT AVMPEELAIE 300 SRLIRENLFQ FAQDLKIRFH IDLVPLRTFQ TLSFKSVKFM EGEKVAILLT PSIFRRLGSV 360 NVVASFLTDI QQVSPCVVVF VDGEGWSDSG GASFKKNLVK NLEFYATMLE SLDATGVSGE 420 WVRRIETFVL RPKIFATVEG GGGMAAPPWR EVFDGAGMRP VALSQFADFQ AECLLGKVQV 480 RGFQVGRRHA ELVLCWHERP LVATSAWRFK C*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 7e-24 | 152 | 507 | 26 | 378 | Protein SCARECROW |
5b3h_A | 7e-24 | 152 | 507 | 25 | 377 | Protein SCARECROW |
5b3h_D | 7e-24 | 152 | 507 | 25 | 377 | Protein SCARECROW |
5hyz_A | 7e-24 | 174 | 508 | 30 | 375 | GRAS family transcription factor containing protein, expressed |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |