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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C016081P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
HD-ZIP |
Protein Properties |
Length: 326aa MW: 37684.5 Da PI: 10.0987 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C016081P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58 | 1.6e-18 | 216 | 270 | 4 | 57 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+ +f++ q++ Le+ F++ +++++ +++ eLA++lgL+ rq+ +WFqNrRa++++
MELO3C016081P1 216 KIRFSDLQIKSLETIFYStESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRR 270
5689*************98***********************************7 PP
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2 | HD-ZIP_I/II | 80.2 | 3.2e-26 | 215 | 304 | 2 | 87 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaL...kraydalkeenerLekeveeL 87
+k r+s+ q+k+LE+ F ++e kL++++Kvela+eLglqprq+a+WFqnrRAR++ ++ ++ + L +++++l+een++L ++v +L
MELO3C016081P1 215 NKIRFSDLQIKSLETIFYSTEsKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTISKASELiiiIKQFKTLQEENNSLLSQVPKL 304
689**************88777********************************987776555544222689999999999999888776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MILVRSSIVV VVVVVVVVVV VVVVVVVVVV VGRGIDEKEE DDEKTRLEEA EGEKSMDLAE 60 SRLMKGMVRG EEEGETEEFI EWWEVRDLRW RWKMKEMERR ERRRIRAMKE RVVRSKVAGS 120 TNDNVAATKN IDFLGRRLWN QKQNPKSGGM GGRGGGEGCN TTTDTLRKCI GEYESQEEEQ 180 IIYSTNFTVP KFEAEAVAYT LHLRRKKRKS RNNMNKIRFS DLQIKSLETI FYSTESKLNS 240 TQKVELATEL GLQPRQIAIW FQNRRARWRR CRTISKASEL IIIIKQFKTL QEENNSLLSQ 300 VPKLFFIFLY SSFYSQAFSL VAIGI*
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