PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

MELO3C015951P1

Organism

Cucumis melo

Taxonomic ID

3656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis

Family

G2-like

Protein Properties

Length: 322aa MW: 36744.7 Da PI: 5.4033

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MELO3C015951P1	genome	MELONOMICS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	59.6	6.8e-19	66	121	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelm...kvkgLtlehvkSHLQkYRl 55 +r Wtpe H+ Fveav+ L ++A+P++ile m +v+ +t++ v+SHLQkYRl MELO3C015951P1 66 TRFIWTPECHQIFVEAVNTL-TLQRAVPRKILEYMrncGVQNITRAIVASHLQKYRL 121 7999**************.9*********44458999***********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.13E-14	63	125	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.4E-20	64	125	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.5E-16	67	121	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MPVDYRNLVS EENSAPVPTA SISTGELGGS ITRELGGPST ADGGEINYFD VDEALQERTG 60 IGPRRTRFIW TPECHQIFVE AVNTLTLQRA VPRKILEYMR NCGVQNITRA IVASHLQKYR 120 LGLKKGHVEV DKASKVPFRT ISFNATSGRN QEENMRNQDE NMRYQDQGNM RYQEGNMRYQ 180 EVNMTNHQGL QENLLNYEMT NQRWPLFEES LPRPGLTQPH MFSPPYLYKN EPTHLQNLPN 240 QFPGYVDANN NNNVIASPNQ FARYADGNNN NNVLASLIND GLSNHVPDND RSHYHKVLRE 300 LIAYQEYNDD DDDIMNIKPE V*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681803	0.0	LN681803.1 Cucumis melo genomic scaffold, anchoredscaffold00026.
GenBank	LN713255	0.0	LN713255.1 Cucumis melo genomic chromosome, chr_1.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0A0KB26	9e-50	A0A0A0KB26_CUCSA; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	2e-14	response regulator 18