PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C015951P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family G2-like
Protein Properties Length: 322aa    MW: 36744.7 Da    PI: 5.4033
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C015951P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like59.66.8e-1966121255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelm...kvkgLtlehvkSHLQkYRl 55 
                     +r  Wtpe H+ Fveav+ L   ++A+P++ile m   +v+ +t++ v+SHLQkYRl
  MELO3C015951P1  66 TRFIWTPECHQIFVEAVNTL-TLQRAVPRKILEYMrncGVQNITRAIVASHLQKYRL 121
                     7999****************.9*************44458999*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.13E-1463125IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.4E-2064125IPR009057Homeodomain-like
TIGRFAMsTIGR015577.5E-1667121IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MPVDYRNLVS EENSAPVPTA SISTGELGGS ITRELGGPST ADGGEINYFD VDEALQERTG  60
IGPRRTRFIW TPECHQIFVE AVNTLTLQRA VPRKILEYMR NCGVQNITRA IVASHLQKYR  120
LGLKKGHVEV DKASKVPFRT ISFNATSGRN QEENMRNQDE NMRYQDQGNM RYQEGNMRYQ  180
EVNMTNHQGL QENLLNYEMT NQRWPLFEES LPRPGLTQPH MFSPPYLYKN EPTHLQNLPN  240
QFPGYVDANN NNNVIASPNQ FARYADGNNN NNVLASLIND GLSNHVPDND RSHYHKVLRE  300
LIAYQEYNDD DDDIMNIKPE V*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818030.0LN681803.1 Cucumis melo genomic scaffold, anchoredscaffold00026.
GenBankLN7132550.0LN713255.1 Cucumis melo genomic chromosome, chr_1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0A0KB269e-50A0A0A0KB26_CUCSA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.12e-14response regulator 18