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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C013772P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
bHLH |
Protein Properties |
Length: 443aa MW: 48984.9 Da PI: 7.9881 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C013772P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 42.7 | 1e-13 | 268 | 313 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+h e+Er+RR+++N++f Lr+++P+ K++Ka+ L A +YI++L
MELO3C013772P1 268 NHVEAERQRRQKLNQRFYALRSVVPNV-----SKMDKASLLADAADYIREL 313
799***********************6.....5****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MDEIIISPSS SSPNSITTLQ QKLRLILHNR HEWWAYSIFW LPSEDIDGNL VFKWGGGHLR 60 DAQDGDNGGG GGSQLNSFVF EEVSMDPVEA GNFAGLEWYY TVSINQSYGA VDNVVGRVFG 120 SSTYIWLTAD NGLYFYDCER VKDARLRGVQ TLVFVSTSNG VLELGSSELI KQDWSLVQCA 180 KSLFGFTLFK QKDHVGVGGG GMIQPQAPSC SGVIKRETGN GGGGSSSDSL SDNSDGNFMS 240 TVNNNNVGKK RGKRSANNKT ELSSLPVNHV EAERQRRQKL NQRFYALRSV VPNVSKMDKA 300 SLLADAADYI RELKSKVQKL ESKLKQPQHQ TSSSMSNAFD QINRSTISTV EQTTMSYTNN 360 NNNNNVEVRL IGSEAMVRVQ CRDENYPSAR LLNVLKDLGL QVHHASLSSV NEMMLQDVVV 420 RVPQVVAWRE KTLRTAILQR LE*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_B | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_E | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_F | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_G | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_I | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_M | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
5gnj_N | 4e-24 | 266 | 330 | 6 | 70 | Transcription factor MYC2 |
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