 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MELO3C012973P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 351aa MW: 40462.2 Da PI: 6.0438 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C012973P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 69.2 | 5.2e-22 | 72 | 127 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k
MELO3C012973P1 72 RKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIK 127
7999************************************************9877 PP
|
| 2 | START | 35.1 | 3.1e-12 | 247 | 324 | 4 | 68 |
HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS..........SCEEEEEEEECCSCHHHHHHHHHCCC CS
START 4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.........dsgealrasgvvdmvlallveelldd 68
ea +el ++a+a++p+Wv+s+ e++n+de+l++f +++ ++ea+r++++v+m++ +lv++++d
MELO3C012973P1 247 DEAVEELKTMAGAGDPLWVRSVetgrEILNYDEYLKTFRFNNNnsntrnclkTHIEASRETALVFMEPSRLVQSFMDE 324
578999********************************8888799*******************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008289 | Molecular Function | lipid binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MEEVDDGSAG GAARRDNNNN HHDTMTAEVS SENSGAVVRS RSEEEEEEEE EGGGQDDQEN 60
ELVDHGCHVK RRKKYHRHTT EQIREMEALF KESPHPDEKQ RQQLSKRLGL SPRQVKFWFQ 120
NRRTQIKAIQ ERHENTLLKA EMEKLREENK AMREISKKKI GCPNCGTADA TQDDIVFTTT 180
EQLRIKNAKL KAEVEKLRAA LGKYPQAAAS PSTYSSGNEQ ETTNRSCLDF YTGIFGLEKS 240
RIMEKVDEAV EELKTMAGAG DPLWVRSVET GREILNYDEY LKTFRFNNNN SNTRNCLKTH 300
IEASRETALV FMEPSRLVQS FMDEVINYHF STLKCLRLFD KYFVCFFFFF *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor required for correct morphological development and maturation of trichomes as well as for normal development of seed coat mucilage. Regulates the frequency of trichome initiation and determines trichome spacing. {ECO:0000269|PubMed:11844112}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated by GEM. {ECO:0000269|PubMed:17450124}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM095653 | 0.0 | KM095653.1 Cucumis sativus multicellular trichome development class IV homeodomain-leucine zipper transcription factor (Gl-2) mRNA, complete cds. |
